B. The importance of the candidate gene LDHA in brain metastasis.
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Many cancer cells produce ATP by converting glucose to lactate, a process essential to the hypoxic environment in which many cancer cells exist. Increased serum level of lactate dehydrogenase-A (LDHA) is likely related to the hypoxic environment of tumor cells. Our RNA-seq data shows that LDHA is highly expressed at genomic (i.e. transcript) level in brain metastases in our animal model. Immunostaining of brain metastasis from animals as well as humans shows a correlation between LDHA expression levels in tumor tissue and tumor size, where LDHA is highly expressed during micrometastasis formation, and is downregulated when tumor size increases (Fig. 2). This indicates that LDHA may be crucial for establishing micrometastases in early steps of experimental brain metastasis, for example when oxygen/nutrition supply is limited due to delayed angiogenesis.
We have now stably knocked out LDHA in our H1_DL2 melanoma cell line. We are currently performing in vitro viability assays and real-time in vitro kinetic measurements of cell metabolism. We are also doing in vivo studies, by injecting LDHA knock-down cells into nod/scid mice, followed by MRI, 18F-FDG PET and 18F-FLT PET to study tumor burden and animal survival. We have access to a tissue microarray with 112 patient brain metastases, and we will correlate patient survival, radiological tumor size and number of metastases with tumor LDHA status.